Workshop Schedule

December 7, 2025 · Bella Center Copenhagen

9:00 AM - 5:00 PM CET
09:00
09:05

Opening Remarks

09:05
09:30

Invited Talk 1

Anastassia Vorobieva, Group Leader at VIB-VUB Center for Structural Biology

09:30
09:45

Contributed Talk: ProFam

ProFam: an autoregressive protein family language model for fitness prediction and sequence generation

Jude Wells

09:45
10:00

Contributed Talk: ProteomeLM

ProteomeLM: A proteome-scale language model enables accurate and rapid prediction of protein-protein interactions

Cyril Malbranke

10:00
10:25

Invited Talk 2

Patrick Byrant, Assistant Professor at Stockholm University

10:30
11:00

Coffee Break

11:00
11:40

Industry Panel: Academia & Industry Interface in BioML

Moderator: Johanna Haffner, PhD student at ETH

Julian Englert (Adaptyv Bio), Charlie Harris (UK Government Sovereign AI), Constance Ferragu (Cradle), Paolo Marcatili (Novo Nordisk)

11:45
12:00

Contributed Talk: BLOSUM Is All You Learn

BLOSUM Is All You Learn — Generative Antibody Models Reflect Evolutionary Priors

Talip Ucar

12:00
12:15

Contributed Talk: Rewriting protein alphabets

Rewriting protein alphabets with language models

Lorenzo Pantolini

12:15
14:00

Poster Session 1 & Lunch

14:00
14:25

Invited Speaker 3

Haris Saeed, PhD student at the University of Oxford

14:30
14:45

Contributed Talk: AbTune

AbTune: layer-wise selective Fine-Tuning of protein language models for Antibodies

Xiatong Xu

14:45
15:00

Contributed Talk: Enzyme Design

Computational Design of Monomeric Variants of Multimeric Enzymes

Jakub Lála

15:00
17:00

Poster Session 2 & Coffee

Same posters as earlier, now with more time to discuss!

Sponsors EU Edition

Cradle
Adaptyv

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