Workshop Schedule

December 7, 2025 ·
8:30 AM - 5:00 PM PST
08:30
08:35

Opening Remarks

08:35
09:00

Invited Speaker - Sam Rodrigues

09:00
09:25

Invited Speaker - Bruno Correia

09:25
09:40

Contributed Talk - SwitchCraft

SwitchCraft: Programmatic Design of State-Switching Proteins

Bowen Jing · Mihir Bafna · Adam Klivans · Bonnie Berger

09:40
09:55

Break

09:55
10:10

Contributed Talk - Caliby

Ensemble-conditioned protein sequence design with Caliby

Richard Shuai · Tianyu Lu · Subhang Bhatti · Petr Kouba · Possu Huang

10:10
10:45

Invited Talk - Hannah Wayment-Steele

10:45
11:10

Invited Talk - Pratyush Tiwary

11:10
11:15

Word from Sponsors

11:15
12:45

Poster Session / Lunch

12:45
01:10

Invited Speaker - Ellen Zhong

01:10
01:25

Contributed Talk - Alternative conformations

Can Biomolecular Structure Predictors Generalize to Alternative Conformations?

Karson Chrispens · Henry van den Bedem · Stephanie Wankowicz · James Fraser

01:25
01:40

Contributed Talk - CryoEM

Separating signal from noise: a self-distillation approach for amortized heterogeneous cryo-EM reconstruction

Minkyu Jeon · Jeffrey Gu · Ambri Ma · Serena Yeung-Levy · Vincent Sitzmann · Ellen Zhong

01:40
1:50

Break

01:50
02:05

Contributed Talk - Taxoformer

TaxoFormer: Hierarchical Transformer for Predicting the Full Taxonomic Lineage of Protein Sequences

Mohammad Parsa · Kathy Wei · Koosh Azimian

02:05
02:20

Contributed Talk - RNA

RNA thermodynamics can be replaced with learnable representations

Murphy Angelo · Debbie Marks · Rose Orenbuch

02:20
02:55

Invited Speaker - Mile Sikic

02:55
03:20

Invited Speaker - Krysztof Fidelis, John Moult

03:20
03:25

Break

03:25
04:00

Panel Discussion

04:05
04:05

Closing Remarks

04:05
05:00

Poster Session

Sponsors US Edition

Xaira
Generate
EvoScale
Latent Labs

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